Seize Your Freedom: Unleash Your Potential with Radical Thinking and AI Innovation in Medicine, Let’s build a convolutional neural network (CNN) for the task of lung nodule detection in chest X-ray images!!

The Journey
4 min readApr 12, 2024
Graphics Credits: Euronews

Today, I am wondering what I should prioritize with my newfound freedom!? Haha. I had my moment for 2 minutes, then I am back in my growth mode. I will not waste another minute not working towards my goals. So let’s take back control of our lives and thrive. Now it’s full-blown powerhouse time.

Manifest, manifest, and manifest.

Grow with AI, towards AI; let’s ride the wave like the greatest surfer.

AI is making news all around, and every company is looking to make or break the market with their finest AI pitch.

But the reality is you will have to have radical thinking to explore great opportunities.

And for that, we need to do our homework. Yep.

So let’s roll it.

In the world of medicine, scanning clearly is crucial. From spotting tumors to diagnosing diseases, every detail matters.

But what if the picture isn’t crystal clear?

That’s where a groundbreaking new tool called Tyche steps in.

Developed by a team of experts from MIT, Harvard, and Massachusetts General Hospital, Tyche is like a super-powered pair of glasses for medical images.

It doesn’t just provide one answer; it gives multiple possibilities, just like how five different doctors might see things differently in an X-ray.

Imagine looking at a lung scan. One doctor might see a tiny shadow, while another might not. Tyche shows all these perspectives, highlighting different areas of the image that could be important. This flexibility is crucial because medical images are rarely black and white.

What’s even more impressive is that Tyche doesn’t need constant training like other AI tools.

Training AI models can be like teaching a student — it takes time and lots of examples.

But Tyche can learn on the fly, adapting to new tasks without needing a complete overhaul.

How does it work?

It’s all about the brain-inspired technology called neural networks. Tyche learns from just a handful of examples, called a “context set.” Then, it uses its neural network to produce multiple predictions based on those examples and the image it’s analyzing. This way, it captures uncertainty and provides a range of possibilities.

The result?

Tyche can help doctors spot things they might have missed and make better decisions. It’s like having a team of experts at your fingertips, all pointing out different things in the same image.

In tests, Tyche proved to be faster and more accurate than other methods. It could even outperform complex models trained on huge datasets. And the best part? It’s not just for one type of medical image — it can be used for everything from heart MRIs to brain scans.

The future looks bright for Tyche. Researchers are already working on making it even smarter, with plans to include text and other types of images in its learning process. With support from organizations like the National Institutes of Health, Tyche is poised to revolutionize the way we analyze medical images, bringing clarity to the forefront of diagnosis and treatment.

Let’s learn through implementing a deep learning model for medical image analysis. Let’s build a convolutional neural network (CNN) for the task of lung nodule detection in chest X-ray images. This example will involve data preprocessing, model training, evaluation, and inference.

import tensorflow as tf
from tensorflow.keras.layers import Input, Conv2D, MaxPooling2D, Flatten, Dense
from tensorflow.keras.models import Model
from tensorflow.keras.optimizers import Adam
from tensorflow.keras.callbacks import ModelCheckpoint
import numpy as np
import matplotlib.pyplot as plt

# Define the CNN model
def build_model(input_shape):
input_img = Input(shape=input_shape)
x = Conv2D(32, (3, 3), activation='relu', padding='same')(input_img)
x = MaxPooling2D((2, 2), padding='same')(x)
x = Conv2D(64, (3, 3), activation='relu', padding='same')(x)
x = MaxPooling2D((2, 2), padding='same')(x)
x = Conv2D(128, (3, 3), activation='relu', padding='same')(x)
x = MaxPooling2D((2, 2), padding='same')(x)
x = Flatten()(x)
x = Dense(128, activation='relu')(x)
output = Dense(1, activation='sigmoid')(x)
model = Model(inputs=input_img, outputs=output)
return model

# Load and preprocess dataset (assuming you have a dataset of chest X-ray images and corresponding labels)
def load_data():
# Load your dataset here (e.g., using TensorFlow Dataset API or from files)
# Preprocess images (e.g., resize, normalize)
# Return preprocessed images and labels
return X_train, y_train, X_test, y_test

# Train the model
def train_model(model, X_train, y_train, X_test, y_test):
model.compile(optimizer=Adam(), loss='binary_crossentropy', metrics=['accuracy'])
checkpoint = ModelCheckpoint('best_model.h5', monitor='val_accuracy', save_best_only=True, mode='max', verbose=1)
history = model.fit(X_train, y_train, batch_size=32, epochs=10, validation_data=(X_test, y_test), callbacks=[checkpoint])
return history

# Evaluate the model
def evaluate_model(model, X_test, y_test):
loss, accuracy = model.evaluate(X_test, y_test)
print(f'Test Loss: {loss}, Test Accuracy: {accuracy}')

# Predict using the trained model
def predict(model, image):
# Preprocess the input image (e.g., resize, normalize)
# Perform inference using the trained model
# Return prediction
return prediction

# Main function
def main():
# Load data
X_train, y_train, X_test, y_test = load_data()

# Build and train the model
input_shape = X_train[0].shape
model = build_model(input_shape)
history = train_model(model, X_train, y_train, X_test, y_test)

# Evaluate the model
evaluate_model(model, X_test, y_test)

# Plot training history (e.g., loss, accuracy)
plt.plot(history.history['loss'], label='Training Loss')
plt.plot(history.history['val_loss'], label='Validation Loss')
plt.plot(history.history['accuracy'], label='Training Accuracy')
plt.plot(history.history['val_accuracy'], label='Validation Accuracy')
plt.legend()
plt.show()

# Example inference
image = np.random.randn(*input_shape) # Example input image
prediction = predict(model, image)
print(f'Prediction: {prediction}')

if __name__ == "__main__":
main()

This code provides a more comprehensive example, including data preprocessing, model training, evaluation, and inference.

However, it’s important to note that building effective models for medical image analysis often requires larger datasets, more complex architectures, and fine-tuning for specific tasks.

Additionally, ensure ethical considerations and compliance with regulations when working with medical data.

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The Journey

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